Background: The causal nature of associations between breakfast and health remain unclear in obese individuals. Objective: To conduct a randomized controlled trial examining causal links between breakfast habits and components of energy balance in free-living obese humans. Design: The Bath Breakfast Project is a randomized controlled trial with repeated-measures at baseline and follow-up amongst a cohort in South-West England aged 21-60 y with Dual-Energy X-Ray Absorptiometry (DXA)-derived fat mass indices ≥13 kg·m-2 (women; n=15) and ≥9 kg·m-2 (men; n=8). Components of energy balance (resting metabolic rate, physical activity thermogenesis, DIT, energy intake) were measured under free-living conditions with random allocation to daily breakfast (≥700 kcal before 1100 h) or extended fasting (0 kcal until 1200 h) for 6 weeks, with baseline and follow-up measures of health markers (e.g. hematology/adipose biopsies). Results: Breakfast resulted in greater physical activity thermogenesis during the morning than when fasting during that period (difference:188 kcal·d-1; 95%CI=40, 335) but without any consistent effect on 24-h physical activity thermogenesis (difference:272 kcal·d-1; 95%CI= -254, 798). Energy intake was not significantly greater with breakfast than fasting (difference:338 kcal·d-1; 95%CI=-313, 988). Body mass increased across both groups over time but with no treatment effects on body composition nor any change in RMR (stable within 8 kcal·d-1). Metabolic/cardiovascular health also did not respond to treatments, except for a reduced insulinemic response to OGTT over time with daily breakfast relative to an increase with daily fasting (p=0.05). Conclusions: In obese adults, daily breakfast causes greater physical activity during the morning, whereas morning fasting results in partial dietary compensation (i.e. greater energy intake) later in the day. There were no differences between groups in weight change and most health outcomes but insulin sensitivity was increased with breakfast relative to fasting. Note on this version: This version includes incorrect values in cells G14 - G24. Please see the newer version to access the data. If you require access to the original version, please request access via the button on this page.