Dataset for "A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest"

Dataset for "A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest"

These are the original datasets underlying the results in the paper "A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest" that were not included directly in the Results section or Supplementary Information. Specifically, they include measurements of pnp4a and tfec expression levels after transcription factor overexpression, and counts in WT and mutant embryos of cells expressing defined marker genes.

Subjects:

Cite this dataset as:
Kelsh, R., Petratou, K., Subkhankulova, T., 2018. Dataset for "A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest". University of Bath Research Data Archive. https://doi.org/10.15125/BATH-00502.

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Data

KleioPetratou_O ... essionFig4Q.xls
application/vnd.ms-office (107kB)
Creative Commons: Attribution 4.0

pnp4a expression levels after transcription factor overexpression, reference Fig 4Q

KleioPetratou_C ... ntsFig3M~N.xlsx
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet (55kB)
Creative Commons: Attribution 4.0

Counts in WT and mutant embryos of cells expressing defined marker genes, reference Fig 3M and N

sox10OvExpr_6HPF_Fig3O.xlsx
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet (12kB)
Creative Commons: Attribution 4.0

tfec expression levels after transcription factor overexpression, reference Fig 3O

Creators

Robert Kelsh
University of Bath

Kleio Petratou
Data Collector
University of Bath

Tatiana Subkhankulova
Data Collector
University of Bath

Coverage

Collection date(s):

From 2014 to 2018

Documentation

Data collection method:

For details of the methodology used, see the Materials and Methods section of the associated manuscript.

Funders

Biotechnology and Biological Sciences Research Council (BBSRC)
https://doi.org/10.13039/501100000268

A Systems Biology Approach to Neural Crest Development
BB/L00769X/1

Publication details

Publication date: 17 August 2018
by: University of Bath

Version: 1

DOI: https://doi.org/10.15125/BATH-00502

URL for this record: https://researchdata.bath.ac.uk/id/eprint/502

Related articles

Petratou, K., Subkhankulova, T., Lister, J. A., Rocco, A., Schwetlick, H. and Kelsh, R. N., 2018. A systems biology approach uncovers the core gene regulatory network governing iridophore fate choice from the neural crest. PLOS Genetics, 14(10), p.e1007402. Available from: https://doi.org/10.1371/journal.pgen.1007402.

Contact information

Please contact the Research Data Service in the first instance for all matters concerning this item.

Contact person: Robert Kelsh

Departments:

Faculty of Science
Biology & Biochemistry