DFT Dataset: Mg Intercalation into (OH,F)-Substituted Anatase TiO2
DFT calculation inputs and output, and analysis code to support the computational results in "Controlled Fluorination Reaction of Anatase to Promote Mg2+ Mobility in Rechargeable Magnesium Batteries" Ma et al. Chem. Comm. 2018.
Cite this dataset as:
              
  Morgan, B.,
2018.
DFT Dataset: Mg Intercalation into (OH,F)-Substituted Anatase TiO2.
Bath: University of Bath Research Data Archive.
Available from: https://doi.org/10.15125/BATH-00545.
            
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Data
data_Mg_F_TiO2-master.zip
application/zip (900MB)
Creative Commons: Attribution 4.0
This dataset contains DFT calculation inputs and outpus and analysis codes for calculation of Mg intercalation energies into (OH,F)-substituted anatase TiO2. More details on these calculations and analysis are given in Ma et al., Chem. Comm. 2018: "Controlled Hydroxy-Fluorination Reaction of Anatase to Promote Mg2+ Mobility in Rechargeable Magnesium Batteries"
Creators
Benjamin Morgan
                  
                  
University of Bath
                
Contributors
University of Bath
                  
Rights Holder
                
Coverage
Collection date(s):
From 1 July 2018 to 15 August 2018
Documentation
Data collection method:
All DFT calculations were performed using VASP 5.4.4 (vasp.5.4.4.18Apr17-6-g9f103f2a35).
Data processing and preparation activities:
The VASP output data have been parsed and collated using the `vasp_summary` script contained in the `vasppy` Python package. This dataset is then used to calculate a set of Mg intercalation energies within a Jupyter notebook. The data parsing and analysis steps are described as a Snakemake workflow.
Technical details and requirements:
The .zip archive can be extracted by most zip applications. To rerun the DFT calculations in this dataset the appropriate pseudopotentials are needed. These are not included in this dataset due to the VASP license conditions. Each calculation directory contains a corresponding `POTCAR.spec` file that specifies the pseudopotentials used. These calculations use pseudopotentials from the VASP 5.4 set. The data analysis workflow has the following Python package requirements: ``` numpy pandas vasppy >= 0.4.0.4 jupyter version-information matplotlib snakemake pyyaml nbconvert >= 4.2.0 ``` From the top level directory, the analysis workflow can be run from a *nix command prompt with ``` pip install -r requirements snakemake clean snakemake ``` Full details are given in the top-level `README.md` file
Templates
README.md
text/plain (4kB)
Creative Commons: Attribution 4.0
Markdown README file.
Funders
Engineering and Physical Sciences Research Council
                  
https://doi.org/10.13039/501100000266
                
Faraday Institute Call - Multi-Scale Modelling
                  
FIRG003
                
Royal Society
                  
https://doi.org/10.13039/501100000288
                
Dr B Morgan URF - Modelling Collective Lithium-Ion Dynamics in Battery Materials
                  
UF130329
                
Publication details
            
              Publication date: 17 August 2018
            
              
by: University of Bath
            
            
Version: 1
DOI: https://doi.org/10.15125/BATH-00545
URL for this record: https://researchdata.bath.ac.uk/545
Related papers and books
Ma, J., Koketsu, T., Morgan, B. J., Legein, C., Body, M., Strasser, P., and Dambournet, D., 2018. Controlled hydroxy-fluorination reaction of anatase to promote Mg2+ mobility in rechargeable magnesium batteries. Chemical Communications, 54(72), 10080-10083. Available from: https://doi.org/10.1039/c8cc04136a.
Related datasets and code
Morgan, B., 2018. DFT dataset: X=(Li,Na,Ca,Mg,Al) Intercalation into (F/OH)-Substituted Anatase TiO2. Version 1. Bath: University of Bath Research Data Archive. Available from: https://doi.org/10.15125/BATH-00473.
Contact information
Please contact the Research Data Service in the first instance for all matters concerning this item.
Contact person: Benjamin Morgan
Faculty of Science
              
Chemistry
